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Table 1 Homologous GPCR experimental structures used for the comparative modelling of the TSHR, FSHR and LHR

From: Structure and activation of the TSH receptor transmembrane domain

Receptor

Species

PDB-Id

State

Resolution

TMD identitya (%)

Used for the modelling of

References

TMD_I

TMD_In

TMD_Ac

CXC chemokine receptor type 1

Human

2LNL

Inactive

NMR

20.7

✓

✖

✖

[50]

β1-Adrenergic receptor

Turkey

2VT4

Inactive

2.7 Ã…

18.4

✓

✖

✖

[51]

Rhodopsin

Squid

2Z73

Inactive

2.50 Ã…

17.6

✓

✖

✖

[52]

Adenosine A2A receptor

Human

3EML

Inactive

2.60 Ã…

21.0

✓

✖

✖

[53]

CXC chemokine receptor type 4

Human

3ODU

Inactive

2.50 Ã…

19.5

✓

✖

✖

[54]

Histamine H1 receptor

Human

3RZE

Inactive

3.10 Ã…

18.0

✓

✖

✖

[55]

Sphingosine 1-phosphate receptor 1

Human

3V2Y

Inactive

2.80 Ã…

17.5

✓

✖

✖

[56]

Proteinase-activated receptor 1

Human

3VW7

Inactive

2.20 Ã…

17.6

✓

✖

✖

[57]

M3 muscarinic acetylcholine receptor

Rat

4DAJ

Inactive

3.40 Ã…

20.5

✓

✖

✖

[58]

κ-Opioid receptor

Human

4DJH

Inactive

2.90 Ã…

18.0

✓

✖

✖

[59]

μ-Opioid receptor

Mouse

4DKL

Inactive

2.80 Ã…

18.8

✓

✖

✖

[60]

Nociceptin/orphanin FQ receptor

Human

4EA3

Inactive

3.01 Ã…

20.7

✓

✖

✖

[61]

δ-Opioid receptor

Mouse

4EJ4

Inactive

3.40 Ã…

20.0

✓

✖

✖

[62]

Rhodopsin

Bovine

1U19

Inactive

2.20 Ã…

17.7

✓

✓

✖

[22]

β2-Adrenergic receptor

Human

2RH1

Inactive

2.40 Ã…

21.4

✓

✓

✖

[23]

M2 muscarinic acetylcholine receptor

Human

3UON

Inactive

3.00 Ã…

19.7

✓

✓

✖

[24]

Metarhodopsin II

Bovine

3PQR

Active

2.85 Ã…

17.7

✖

✖

✓

[19]

β2-Adrenergic receptor-Gs protein complex

Human

3SN6

Active

3.20 Ã…

21.4

✖

✖

✓

[20]

M2 muscarinic acetylcholine receptor

Human

4MQS

Active

3.50 Ã…

17.7

✖

✖

✓

[21]

Smoothened receptor

Human

4LKV

Inactive

2.45 Ã…

–

ECL-1

[63]

  1. aAmino acid sequence identity between the TSHR TMD and the homologous GPCRs